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  5. AMTR_s00148p00049970

AMTR_s00148p00049970 (BME3-ZF, BME3, GATA8,...)


Aliases : BME3-ZF, BME3, GATA8, evm_27.TU.AmTr_v1.0_scaffold00148.27

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.GATA transcription factor


Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00148p00049970
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT2G45050 GATA2 GATA transcription factor 2 0.06 OrthoFinder output from all 47 species
AT3G60530 GATA4 GATA transcription factor 4 0.03 OrthoFinder output from all 47 species
AT4G34680 GATA3 GATA transcription factor 3 0.04 OrthoFinder output from all 47 species
AT5G26930 GATA23 GATA transcription factor 23 0.04 OrthoFinder output from all 47 species
Adi_g036776 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108833 GATA4 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g01113 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02207 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03153 GATA5 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g16772 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32134 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09430 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11283 GATA4 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20978 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38669 GATA2 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g48899 GATA4 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g52135 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14771 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12583 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene12734.t1 GATA5, Aspi01Gene12734 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57616.t1 GATA5, Aspi01Gene57616 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene64140.t1 GATA4, Aspi01Gene64140 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69106.t1 GATA4, Aspi01Gene69106 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02619 GATA2 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04557 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05826 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.36G061000.1 GATA12, Ceric.36G061000 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g06612 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11064 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05309 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06887 GATA2 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07436 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19706 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05496 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06344 GATA5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06867 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08197 GATA1 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08339 GATA12 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18348 GATA1 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20942 GATA15 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21727 GATA1 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26857 GATA12 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015204001 GNC, GATA21 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01017011001 GATA12 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01024194001 GATA5 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01035614001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
Gb_13387 GATA9 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Gb_24250 GATA9 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Gb_34837 GATA20 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
LOC_Os01g54210.1 GATA12, LOC_Os01g54210 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
LOC_Os02g43150.1 GATA5, LOC_Os02g43150 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
LOC_Os02g56250.1 BME3-ZF, BME3,... transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
LOC_Os05g49280.1 GATA20, LOC_Os05g49280 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
LOC_Os06g37450.1 GATA22, CGA1,... transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
LOC_Os12g42970.1 GATA4, LOC_Os12g42970 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Len_g12686 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24180 GATA12 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g37564 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13065 GATA4 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g34157 GATA5 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g40724 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g22038 GATA11 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44466 GATA1 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g25103 GATA1 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000079 GATA9 transcription factor *(A/B-GATA) & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009072 GATA4 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023073 GATA9 transcription factor *(A/B-GATA) & original description:... 0.02 OrthoFinder output from all 47 species
Solyc02g062760.4.1 HAN, MNP,... transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Solyc04g015360.3.1 BME3-ZF, BME3,... transcription factor (GATA) 0.08 OrthoFinder output from all 47 species
Solyc05g053500.4.1 GATA1, Solyc05g053500 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Solyc05g056120.3.1 BME3-ZF, BME3,... transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Solyc08g066510.3.1 GATA12, Solyc08g066510 transcription factor (GATA) 0.05 OrthoFinder output from all 47 species
Solyc10g018560.2.1 GATA4, Solyc10g018560 transcription factor (GATA) 0.05 OrthoFinder output from all 47 species
Spa_g16103 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55775 GATA12 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14454 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g43678 GATA12 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e016165_P001 BME3-ZF, BME3,... transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Zm00001e026256_P001 GATA23, Zm00001e026256 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e029060_P002 GATA9, Zm00001e029060 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e037876_P002 GATA4, Zm00001e037876 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000679 Znf_GATA 154 187
No external refs found!