AMTR_s00148p00073630 (CNGC15, ATCNGC15,...)

Aliases : CNGC15, ATCNGC15, evm_27.TU.AmTr_v1.0_scaffold00148.48

Description : Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC-type)

Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00148p00073630

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00270020	evm_27.TU.AmTr_v1...	External stimuli response.temperature.temperature...	0.03	OrthoFinder output from all 47 species
AT1G15990	CNGC7, ATCNGC7	cyclic nucleotide gated channel 7	0.01	OrthoFinder output from all 47 species
Ala_g24639	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g20415	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.02	OrthoFinder output from all 47 species
GSVIVT01025208001	CNGC15, ATCNGC15	Solute transport.channels.VIC superfamily.cyclic...	0.02	OrthoFinder output from all 47 species
GSVIVT01029404001	ATCNGC20, CNGC20, CNBT1	Solute transport.channels.VIC superfamily.cyclic...	0.01	OrthoFinder output from all 47 species
GSVIVT01029407001	ATCNGC20, CNGC20, CNBT1	Solute transport.channels.VIC superfamily.cyclic...	0.02	OrthoFinder output from all 47 species
LOC_Os12g06570.1	CNGC18,...	cyclic nucleotide-gated cation channel (CNGC)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000595	cNMP-bd_dom	517	611
IPR005821	Ion_trans_dom	144	412

External Links

No external refs found!