AMTR_s00152p00081700 (FD-1, FD, atbzip14,...)

Aliases : FD-1, FD, atbzip14, evm_27.TU.AmTr_v1.0_scaffold00152.26

Description : RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor

Gene families : OG0000314 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000314_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00152p00081700

Target	Alias	Description	ECC score	Gene Family Method
AT2G41070	DPBF4, ATBZIP12, EEL	Basic-leucine zipper (bZIP) transcription factor family protein	0.03	OrthoFinder output from all 47 species
AT3G44460	DPBF2, AtbZIP67	Basic-leucine zipper (bZIP) transcription factor family protein	0.03	OrthoFinder output from all 47 species
AT4G35900	FD-1, FD, atbzip14	Basic-leucine zipper (bZIP) transcription factor family protein	0.03	OrthoFinder output from all 47 species
Adi_g001969	ABF1	bZIP class-A transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g008679	ABF1	bZIP class-A transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene31919.t1	ABF1, Aspi01Gene31919	bZIP class-A transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g04792	DPBF3, AREB3	bZIP class-A transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01006332001	FD-1, FD, atbzip14	Protein FD OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
LOC_Os05g36160.1	GBF4, LOC_Os05g36160	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species
Nbi_g02994	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g11141	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g41440	DPBF3, AREB3	bZIP class-A transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g43939	DPBF3, AREB3	bZIP class-A transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g03875	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g55556	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019760	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original...	0.02	OrthoFinder output from all 47 species
Solyc09g009490.4.1	ABI5, GIA1,...	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0005506	iron ion binding	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004827	bZIP	189	233

External Links

No external refs found!

AMTR_s00152p00081700 (FD-1, FD, atbzip14,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation