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  5. AMTR_s00156p00061400

AMTR_s00156p00061400 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00156.32

Description : External stimuli response.biotic stress.symbiont-associated response.symbiosis signalling pathway.NSP1-NSP2 nodulation initiation complex.NSP2 component


Gene families : OG0002153 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00156p00061400

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00099410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.07 OrthoFinder output from all 47 species
Adi_g043317 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055203 No alias GRAS-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g080255 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species
Adi_g087308 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115825 RGA2, GAI GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04746 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.05 OrthoFinder output from all 47 species
Aev_g19082 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species
Ala_g14652 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species
Dde_g41852 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species
Len_g30763 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.06 OrthoFinder output from all 47 species
Nbi_g10445 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species
Ore_g09457 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species
Ore_g12299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09579 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.05 OrthoFinder output from all 47 species
Ppi_g04662 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species
Spa_g22375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25920 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005202 TF_GRAS 125 491
No external refs found!