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  5. AMTR_s00165p00044350

AMTR_s00165p00044350 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00165.24

Description : Universal stress protein PHOS32 OS=Arabidopsis thaliana


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00165p00044350

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00028670 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aev_g01816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11605 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000692.35 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g39061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035248001 No alias No description available 0.03 OrthoFinder output from all 47 species
Lfl_g00411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02780 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10303844g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g02950.1 No alias Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp2g04750.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g00391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g58299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011294 No alias not classified & original description: CDS=1-651 0.03 OrthoFinder output from all 47 species
Sam_g17800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26935 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008430 selenium binding IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 5 158
No external refs found!