Aliases : RAB-A2C, ATRAB11A, RABA2c, ATRAB-A2C, ATRABA2C, evm_27.TU.AmTr_v1.0_scaffold00165.39
Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.A-class RAB GTPase
Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G28550 | RABA1i, AtRABA1i | RAB GTPase homolog A1I | 0.03 | OrthoFinder output from all 47 species | |
| AT2G33870 | ArRABA1h | RAB GTPase homolog A1H | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g078039 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g42193 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene00456.t1 | AtRABA1f,... | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020961.97 | AtRABA1e, RABA1e | Vesicle trafficking.regulation of membrane tethering and... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g08021 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01023225001 | ATRABA2A,... | Vesicle trafficking.regulation of membrane tethering and... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_37703 | ATRABA2A,... | A-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g15790.1 | AtRABA1f,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g23851 | AtRABA5a, RABA5a | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g00826 | RABA2b,... | A-class RAB GTPase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g40897 | No alias | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g16289 | ATRABA2A,... | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e035644_P001 | AtRABA5a,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005525 | GTP binding | IEA | Interproscan |
| BP | GO:0007264 | small GTPase mediated signal transduction | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004221 | obsolete ubiquitin thiolesterase activity | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0008172 | S-methyltransferase activity | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| MF | GO:0008898 | S-adenosylmethionine-homocysteine S-methyltransferase activity | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001806 | Small_GTPase | 14 | 174 |
| No external refs found! |
