AMTR_s00171p00060310 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00171.44

Description : Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana


Gene families : OG0000282 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000282_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00171p00060310

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene54522.t1 ADH2, PAR2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.38G022800.1 ATADH, ATADH1,... not classified & original description: pacid=50580193... 0.02 OrthoFinder output from all 47 species
Cre12.g543350 ADH2, PAR2,... Protein modification.S-nitrosylation and... 0.02 OrthoFinder output from all 47 species
Cre12.g543400 ADH2, PAR2,... Protein modification.S-nitrosylation and... 0.02 OrthoFinder output from all 47 species
LOC_Os02g42520.2 LOC_Os02g42520 Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g10480.1 ATADH, ATADH1,... alcohol dehydrogenase 0.03 OrthoFinder output from all 47 species
MA_898515g0010 ATADH, ATADH1, ADH1, ADH Alcohol dehydrogenase OS=Malus domestica... 0.03 OrthoFinder output from all 47 species
Spa_g06674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0017182 peptidyl-diphthamide metabolic process IEP HCCA
BP GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018202 peptidyl-histidine modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:1900247 regulation of cytoplasmic translational elongation IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013149 ADH-like_C 207 331
IPR013154 ADH-like_N 37 163
No external refs found!