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  5. AMTR_s00176p00042540

AMTR_s00176p00042540 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00176.17

No description available


Gene families : OG0000604 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000604_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00176p00042540
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT1G01630 No alias Sec14p-like phosphatidylinositol transfer family protein 0.03 OrthoFinder output from all 47 species
Aev_g06046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48077 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25417 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g00546 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g01492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45275.t1 Aspi01Gene45275 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63687.t1 Aspi01Gene63687 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0040.g026623 No alias not classified & original description: CDS=1-759 0.04 OrthoFinder output from all 47 species
Cba_g69515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21088 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g25079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11684 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40863 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020474 No alias not classified & original description: CDS=191-1057 0.03 OrthoFinder output from all 47 species
Sam_g37085 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38416 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38417 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e018770_P001 Zm00001e018770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 42 195
No external refs found!