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  5. AMTR_s00182p00020350

AMTR_s00182p00020350 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00182.7

Description : Solute transport.primary active transport.V-type ATPase complex.membrane V0 subcomplex.subunit c


Gene families : OG0000979 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000979_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00182p00020350
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Ala_g09766 No alias subunit c of V-type ATPase membrane V0 subcomplex &... 0.03 OrthoFinder output from all 47 species
Aop_g01495 No alias subunit c of V-type ATPase membrane V0 subcomplex &... 0.02 OrthoFinder output from all 47 species
Cre06.g257450 No alias Solute transport.primary active transport.V-type ATPase... 0.02 OrthoFinder output from all 47 species
Dcu_g05181 No alias subunit c of V-type ATPase membrane V0 subcomplex &... 0.04 OrthoFinder output from all 47 species
LOC_Os02g34510.1 AVA-2PE, AVA-P2,... subunit c of V-type ATPase membrane V0 subcomplex 0.05 OrthoFinder output from all 47 species
LOC_Os11g06890.1 AVA-2PE, AVA-P2,... subunit c of V-type ATPase membrane V0 subcomplex 0.05 OrthoFinder output from all 47 species
LOC_Os12g07140.1 AVA-2PE, AVA-P2,... subunit c of V-type ATPase membrane V0 subcomplex 0.05 OrthoFinder output from all 47 species
Pnu_g24852 AVA-2PE, AVA-P2, ATVHA-C2 subunit c of V-type ATPase membrane V0 subcomplex &... 0.03 OrthoFinder output from all 47 species
Pp3c1_1260V3.1 AVA-2PE, AVA-P2,... ATPase, F0/V0 complex, subunit C protein 0.02 OrthoFinder output from all 47 species
Pp3c2_36900V3.1 Pp3c2_36900 ATPase, F0/V0 complex, subunit C protein 0.04 OrthoFinder output from all 47 species
Ppi_g20599 No alias subunit c of V-type ATPase membrane V0 subcomplex &... 0.03 OrthoFinder output from all 47 species
Solyc02g084360.3.1 AVA-2PE, AVA-P2,... subunit c of V-type ATPase membrane V0 subcomplex 0.03 OrthoFinder output from all 47 species
Solyc04g081090.3.1 AVA-2PE, AVA-P2,... subunit c of V-type ATPase membrane V0 subcomplex 0.03 OrthoFinder output from all 47 species
Spa_g41557 No alias subunit c of V-type ATPase membrane V0 subcomplex &... 0.02 OrthoFinder output from all 47 species
Tin_g16194 No alias subunit c of V-type ATPase membrane V0 subcomplex &... 0.03 OrthoFinder output from all 47 species
Zm00001e009048_P001 AVA-2PE, AVA-P2,... subunit c of V-type ATPase membrane V0 subcomplex 0.05 OrthoFinder output from all 47 species
Zm00001e024502_P002 AVA-2PE, AVA-P2,... subunit c of V-type ATPase membrane V0 subcomplex 0.03 OrthoFinder output from all 47 species
Zm00001e029675_P001 AVA-2PE, AVA-P2,... subunit c of V-type ATPase membrane V0 subcomplex 0.04 OrthoFinder output from all 47 species
Zm00001e039470_P001 AVA-2PE, AVA-P2,... subunit c of V-type ATPase membrane V0 subcomplex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015078 proton transmembrane transporter activity IEA Interproscan
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR002379 ATPase_proteolipid_c-like_dom 92 156
IPR002379 ATPase_proteolipid_c-like_dom 13 77
No external refs found!