1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00183p00034990

AMTR_s00183p00034990 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00183.14

No description available


Gene families : OG0000540 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000540_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00183p00034990
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AT1G68450 No alias VQ motif-containing protein 0.06 OrthoFinder output from all 47 species
AT3G18360 No alias VQ motif-containing protein 0.03 OrthoFinder output from all 47 species
Aev_g09743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22625 MKS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01180.t1 Aspi01Gene01180 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09531.t1 MKS1, Aspi01Gene09531 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene36396.t1 Aspi01Gene36396 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene36397.t1 Aspi01Gene36397 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene36398.t1 Aspi01Gene36398 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene71148.t1 Aspi01Gene71148 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g00588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.33G036000.1 Ceric.33G036000 not classified & original description: pacid=50606361... 0.02 OrthoFinder output from all 47 species
Ceric.33G036100.1 Ceric.33G036100 not classified & original description: pacid=50606620... 0.05 OrthoFinder output from all 47 species
Dde_g51120 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001661001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_01280 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_04497 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_08510 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_22052 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_37589 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g01260.1 MKS1, LOC_Os08g01260 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Len_g57301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g29318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_3573g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_6029g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_87081g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g19744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004079 No alias not classified & original description: CDS=1-978 0.05 OrthoFinder output from all 47 species
Sam_g37259 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo409496 MKS1 No description available 0.03 OrthoFinder output from all 47 species
Spa_g31223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002417_P001 Zm00001e002417 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e037399_P001 MKS1, Zm00001e037399 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 49 74
No external refs found!