Aliases : SOM, evm_27.TU.AmTr_v1.0_scaffold00183.27
Description : RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor
Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aop_g06090 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Cre01.g031004 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.03 | OrthoFinder output from all 47 species | |
| Cre03.g144947 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g27978 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01024728001 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g28211 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g22895 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0030.g010425 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
| MF | GO:0004499 | N,N-dimethylaniline monooxygenase activity | IEP | HCCA |
| MF | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| MF | GO:0050661 | NADP binding | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000571 | Znf_CCCH | 123 | 145 |
| No external refs found! |
