Aliases : BW52, ATMYB52, MYB52, evm_27.TU.AmTr_v1.0_scaffold00186.1
Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor
Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00186p00015620 | |
| Cluster | HCCA: Cluster_119 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00006p00225600 | MYBR1, MYB44,... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G14350 | AtMYB124, MYB124, FLP | Duplicated homeodomain-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT1G17950 | BW52, ATMYB52, MYB52 | myb domain protein 52 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G29020 | MYB110, AtMYB110 | myb domain protein 110 | 0.03 | OrthoFinder output from all 47 species | |
| AT4G33450 | ATMYB69, MYB69 | myb domain protein 69 | 0.04 | OrthoFinder output from all 47 species | |
| AT5G17800 | MYB56, AtMYB56 | myb domain protein 56 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G40360 | MYB115, AtMYB115 | myb domain protein 115 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g013098 | AtMYB109, MYB109 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g020716 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g109382 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g01523 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g38609 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g06590 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g12161 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g12163 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g22604 | AtMYB124, MYB124, FLP | MYB class-R2R3 transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g30670 | AtMYB109, MYB109 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08938 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000218 | AtMYB117, LOF1, MYB117 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0018.g014830 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0254.g060469 | MYB88, AtMYB88 | MYB class-R2R3 transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g03902 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.03G075000.1 | MYB56, AtMYB56,... | MYB class-R2R3 subgroup-21 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.19G007400.1 | LOF2, MYB105,... | MYB class-R2R3 subgroup-21 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g10100 | MYB73, ATMYB73 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g05817 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g12904 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g24773 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g24947 | ATMYB3R5, MYB3R-5 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009566001 | MYB70, AtMYB70 | RNA biosynthesis.transcriptional activation.MYB... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01010006001 | BW52, ATMYB52, MYB52 | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_24073 | MYB77 | transcription factor (MYB) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g16810.1 | LOF2, MYB105,... | transcription factor (MYB) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g74590.1 | MYBR1, MYB44,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g51110.1 | BW52, ATMYB52,... | transcription factor (MYB) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g28320.1 | MYBR1, MYB44,... | transcription factor (MYB) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g43090.1 | MYBR1, MYB44,... | transcription factor (MYB) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g12130.1 | AtMYB98, MYB98,... | transcription factor (MYB) | 0.04 | OrthoFinder output from all 47 species | |
| MA_948059g0010 | ATMYB3R5, MYB3R-5 | transcription factor (MYB) | 0.04 | OrthoFinder output from all 47 species | |
| Mp3g09350.1 | AtMYB98, MYB98 | transcription factor (MYB) | 0.04 | OrthoFinder output from all 47 species | |
| Mp5g13060.1 | ATMYB3R5, MYB3R-5 | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Mp5g14610.1 | MYB77 | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Mp8g11870.1 | AtMYB117, LOF1, MYB117 | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g07801 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g05843 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g44161 | MYB73, ATMYB73 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g44188 | ATMYB3R5, MYB3R-5 | R1R2R3-MYB transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g24702 | MYB73, ATMYB73 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c17_19960V3.1 | Pp3c17_19960 | No annotation | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g12324 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000153 | MYB56, AtMYB56 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0031.g010615 | AtMYB98, MYB98 | MYB class-R2R3 transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0096.g019382 | MYB73, ATMYB73 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0129.g021926 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Smo6091 | AtMYB117, LOF1, MYB117 | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g098270.1.1 | LOF2, MYB105,... | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| Solyc04g079360.1.1 | MYB77, Solyc04g079360 | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g16126 | MYB56, AtMYB56 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g39449 | AtMYB124, MYB124, FLP | MYB class-R2R3 transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g23248 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005044_P002 | ATMYB119,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005507_P001 | BW52, ATMYB52,... | transcription factor (MYB) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e013910_P001 | MYB77, Zm00001e013910 | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e018391_P001 | MYB54, ATMYB54,... | transcription factor (MYB) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e030480_P001 | MYBR1, MYB44,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e037510_P001 | MYBR1, MYB44,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| CC | GO:0030288 | outer membrane-bounded periplasmic space | IEP | HCCA |
| CC | GO:0042597 | periplasmic space | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
