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  5. AMTR_s00189p00041140

AMTR_s00189p00041140 (ATSS4, SS4, SSIV,...)


Aliases : ATSS4, SS4, SSIV, evm_27.TU.AmTr_v1.0_scaffold00189.6

Description : Carbohydrate metabolism.starch metabolism.synthesis.starch synthase activities.SSIV-type starch synthase


Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00189p00041140

Target Alias Description ECC score Gene Family Method Actions
Cre06.g282000 ATSS3, SS3 Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
Cre16.g665800 ATSS4, SS4, SSIV Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 OrthoFinder output from all 47 species
Dcu_g08981 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012723001 ATSS3, SS3 Carbohydrate metabolism.starch... 0.04 OrthoFinder output from all 47 species
Lfl_g04240 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g08030.1 ATSS4, SS4, SSIV Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 OrthoFinder output from all 47 species
Sam_g51042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 512 751
IPR001296 Glyco_trans_1 805 960
No external refs found!