Aliases : VFB3, evm_27.TU.AmTr_v1.0_scaffold00198.3
Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component
Gene families : OG0001029 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001029_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00198p00016850 | |
| Cluster | HCCA: Cluster_115 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g024460 | VFB4, SKIP2 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g105463 | VFB4, SKIP2 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g14932 | VFB3 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene63599.t1 | VFB2, Aspi01Gene63599 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0088.g042527 | VFB3 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.20G073200.1 | VFB4, SKIP2,... | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g02819 | VFB1 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01000227001 | VFB2 | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g13942 | VFB4, SKIP2 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.05 | OrthoFinder output from all 47 species | |
| MA_10431549g0010 | VFB4, SKIP2 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_179294g0010 | VFB4, SKIP2 | component FBX of SCF E3 ubiquitin ligase complex | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0070.g016647 | VFB3 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e033486_P001 | VFB1, Zm00001e033486 | component FBX of SCF E3 ubiquitin ligase complex | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001810 | F-box_dom | 35 | 68 |
| No external refs found! |
