1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00199p00026650

AMTR_s00199p00026650 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00199.10

Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0001550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001550_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00199p00026650

Target Alias Description ECC score Gene Family Method Actions
Aob_g33434 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16934.t1 Aspi01Gene16934 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0305.g063895 No alias not classified & original description: CDS=1048-1284 0.05 OrthoFinder output from all 47 species
Ehy_g03517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01004470001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01008925001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01014576001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Gb_25842 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os01g57650.1 LOC_Os01g57650 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os03g15790.1 LOC_Os03g15790 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os04g59380.1 LOC_Os04g59380 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os06g46910.1 LOC_Os06g46910 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_103943g0010 No alias C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
MA_13576g0010 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
MA_525155g0010 No alias C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Mp3g21490.1 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Ore_g19150 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g26086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008786_P002 Zm00001e008786 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!