AMTR_s00202p00016130 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00202.2

Description : Heavy metal-associated isoprenylated plant protein 23 OS=Arabidopsis thaliana


Gene families : OG0000090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00202p00016130
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00251970 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G06330 No alias Heavy metal transport/detoxification superfamily protein 0.02 OrthoFinder output from all 47 species
Als_g08491 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09201 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g40949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08784.t1 Aspi01Gene08784 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12058.t1 Aspi01Gene12058 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16661.t1 Aspi01Gene16661 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16664.t1 Aspi01Gene16664 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene50654.t1 Aspi01Gene50654 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53126.t1 Aspi01Gene53126 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53126.t2 Aspi01Gene53126 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58084.t1 Aspi01Gene58084 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59197.t1 Aspi01Gene59197 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0064.g035579 No alias not classified & original description: CDS=1-639 0.01 OrthoFinder output from all 47 species
Ceric.18G044200.1 Ceric.18G044200 not classified & original description: pacid=50621319... 0.02 OrthoFinder output from all 47 species
Ceric.32G005700.1 Ceric.32G005700 not classified & original description: pacid=50598369... 0.02 OrthoFinder output from all 47 species
Dac_g22666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032941001 No alias Heavy metal-associated isoprenylated plant protein 32... 0.03 OrthoFinder output from all 47 species
Gb_20918 No alias Heavy metal-associated isoprenylated plant protein 23... 0.02 OrthoFinder output from all 47 species
LOC_Os08g40130.1 LOC_Os08g40130 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g28924 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g30594 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431832g0020 No alias Heavy metal-associated isoprenylated plant protein 45... 0.02 OrthoFinder output from all 47 species
MA_13573g0010 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_8226951g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g35065 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12884 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03527 HIPP20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo409960 HIPP20 No description available 0.02 OrthoFinder output from all 47 species
Solyc01g066880.3.1 Solyc01g066880 Heavy metal-associated isoprenylated plant protein 36... 0.01 OrthoFinder output from all 47 species
Solyc02g076880.4.1 Solyc02g076880 Heavy metal-associated isoprenylated plant protein 28... 0.02 OrthoFinder output from all 47 species
Solyc11g007200.3.1 CCH, Solyc11g007200 copper chaperone (CCH) 0.02 OrthoFinder output from all 47 species
Solyc11g073020.3.1 Solyc11g073020 Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g31216 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g15540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015864_P001 Zm00001e015864 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e027825_P001 Zm00001e027825 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e029113_P001 HIPP20, Zm00001e029113 Heavy metal-associated isoprenylated plant protein 20... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004372 glycine hydroxymethyltransferase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008883 glutamyl-tRNA reductase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0016032 viral process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!