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  5. AMTR_s00325p00013820

AMTR_s00325p00013820 (ATWBC11, ABCG11, DSO,...)


Aliases : ATWBC11, ABCG11, DSO, COF1, WBC11, evm_27.TU.AmTr_v1.0_scaffold00325.2

Description : ABC transporter G family member 11 OS=Arabidopsis thaliana


Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00325p00013820
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00239660 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00325p00016250 evm_27.TU.AmTr_v1... ABC transporter G family member 11 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s01529p00010210 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Adi_g116530 ATWBC11, ABCG11,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g14052 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g43358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06000 ATWBC11, ABCG11,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29827 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24079.t1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09105 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46097 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18232 ATWBC11, ABCG11,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031529001 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Gb_05238 ATWBC11, ABCG11,... subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
Gb_18403 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). wax lipid exporter... 0.03 OrthoFinder output from all 47 species
Gb_26722 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os04g44610.1 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os12g22284.1 ATWBC11, ABCG11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_10436774g0010 ATWBC11, ABCG11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_10436774g0020 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_69480g0010 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). wax lipid exporter... 0.02 OrthoFinder output from all 47 species
MA_7934311g0010 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp2g16700.1 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Pir_g06208 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g32849 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08634 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g105450.4.1 ATWBC11, ABCG11,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc03g019760.4.1 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Spa_g45324 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 2 72
No external refs found!