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  5. AMTR_s00334p00011840

AMTR_s00334p00011840 (PETA,...)


Aliases : PETA, evm_27.TU.AmTr_v1.0_scaffold00334.3

Description : Photosynthesis.photophosphorylation.cytochrome b6/f complex.apocytochrome f component PetA


Gene families : OG0007601 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007601_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00334p00011840
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
ATCG00540 PETA photosynthetic electron transfer A 0.03 OrthoFinder output from all 47 species
Aev_g01305 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.06 OrthoFinder output from all 47 species
Als_g00738 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.04 OrthoFinder output from all 47 species
Aob_g01376 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Ceric.02G014700.1 PETA, Ceric.02G014700 apocytochrome f component *(PetA) of cytochrome b6/f... 0.05 OrthoFinder output from all 47 species
Ceric.05G050200.1 PETA, Ceric.05G050200 not classified & original description: pacid=50577900... 0.04 OrthoFinder output from all 47 species
Ceric.05G050300.1 PETA, Ceric.05G050300 apocytochrome f component *(PetA) of cytochrome b6/f... 0.07 OrthoFinder output from all 47 species
Ceric.16G018100.1 PETA, Ceric.16G018100 apocytochrome f component *(PetA) of cytochrome b6/f... 0.04 OrthoFinder output from all 47 species
Ceric.16G060400.1 PETA, Ceric.16G060400 not classified & original description: pacid=50589755... 0.03 OrthoFinder output from all 47 species
Ceric.33G022700.1 PETA, Ceric.33G022700 apocytochrome f component *(PetA) of cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Ceric.38G007000.1 PETA, Ceric.38G007000 apocytochrome f component *(PetA) of cytochrome b6/f... 0.07 OrthoFinder output from all 47 species
Gb_37933 PETA Cytochrome f OS=Cycas taitungensis (sp|a6h5j1|cyf_cycta : 137.0) 0.04 OrthoFinder output from all 47 species
Gb_41662 PETA Cytochrome f OS=Cycas taitungensis (sp|a6h5j1|cyf_cycta : 175.0) 0.04 OrthoFinder output from all 47 species
LOC_Os01g65902.1 PETA, LOC_Os01g65902 apocytochrome f component PetA of cytochrome b6/f complex 0.03 OrthoFinder output from all 47 species
LOC_Os06g39738.1 PETA, LOC_Os06g39738 apocytochrome f component PetA of cytochrome b6/f complex 0.03 OrthoFinder output from all 47 species
LOC_Os10g21290.1 PETA, LOC_Os10g21290 apocytochrome f component PetA of cytochrome b6/f complex 0.02 OrthoFinder output from all 47 species
Lfl_g06925 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.05 OrthoFinder output from all 47 species
Mp1g27760.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g09593 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Ore_g43249 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Sam_g03361 No alias apocytochrome f component *(PetA) of cytochrome b6/f... 0.04 OrthoFinder output from all 47 species
Smo236857 PETA Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Zm00001e042498_P001 PETA, Zm00001e042498 Cytochrome f OS=Zea mays (sp|p46617|cyf_maize : 342.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
MF GO:0009055 electron transfer activity IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
CC GO:0031361 obsolete integral component of thylakoid membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0008535 respiratory chain complex IV assembly IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002325 Cyt_f 202 320
No external refs found!