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  5. AMTR_s00988p00000580

AMTR_s00988p00000580 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00988.1

Description : Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase


Gene families : OG0000437 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00988p00000580
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00157p00085110 ACA5, ATACA5,... Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase 0.02 OrthoFinder output from all 47 species
AMTR_s00157p00093970 ACA4, ATACA4,... Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase 0.07 OrthoFinder output from all 47 species
AMTR_s01171p00007730 ACA4, ATACA4,... Alpha carbonic anhydrase 6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G08065 ACA5, ATACA5 alpha carbonic anhydrase 5 0.03 OrthoFinder output from all 47 species
Aev_g12622 ATACA2, ACA2 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17884.t1 ATACA7, ACA7,... EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17885.t1 ATACA7, ACA7,... EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42581.t2 ATACA2, ACA2,... EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42583.t1 CAH1, ACA1,... EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42584.t2 ATACA2, ACA2,... EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45371.t1 ATACA7, ACA7,... EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g40770.1 ATACA7, ACA7,... no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os08g32780.1 ATACA7, ACA7,... Bifunctional monodehydroascorbate reductase and carbonic... 0.03 OrthoFinder output from all 47 species
LOC_Os08g32840.1 ATACA7, ACA7,... Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g36630.1 ATACA7, ACA7,... Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g36680.1 ACA5, ATACA5,... Alpha carbonic anhydrase 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_100242g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10432594g0010 ATACA7, ACA7 Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10432594g0020 ATACA7, ACA7 Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_6611553g0010 ATACA7, ACA7 Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_74545g0010 ATACA2, ACA2 Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Mp2g17100.1 ACA4, ATACA4 Alpha carbonic anhydrase 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp8g09490.1 ATACA6, ACA6 Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... 0.01 OrthoFinder output from all 47 species
Mp8g15470.1 ACA4, ATACA4 Alpha carbonic anhydrase 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0539.g027481 ATACA2, ACA2 EC_4.2 carbon-oxygen lyase & original description: CDS=619-1599 0.03 OrthoFinder output from all 47 species
Smo416362 ATACA7, ACA7 Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc11g069640.2.1 ATACA7, ACA7,... Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g03420 ATACA7, ACA7 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003788_P001 ATACA7, ACA7,... Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e022127_P001 ATACA7, ACA7,... Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e037620_P004 ATACA7, ACA7,... Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
InterPro domains Description Start Stop
IPR001148 CA_dom 10 54
No external refs found!