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  5. AMTR_s01542p00001140

AMTR_s01542p00001140 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold01542.1

Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase


Gene families : OG0000436 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000436_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s01542p00001140
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00131000 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
Aev_g12895 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18342 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04008 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g08816 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46287 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47878 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59187.t1 Aspi01Gene59187 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s1035.g095886 No alias EC_3.2 glycosylase & original description: CDS=217-2184 0.02 OrthoFinder output from all 47 species
Azfi_s1903.g107957 No alias EC_3.2 glycosylase & original description: CDS=887-1975 0.02 OrthoFinder output from all 47 species
Dac_g02846 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06336 No alias EC_3.2 glycosylase & original description: none 0.11 OrthoFinder output from all 47 species
Dcu_g36334 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07578 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
MA_719501g0010 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
Mp1g11940.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
Nbi_g13297 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002581 No alias EC_3.2 glycosylase & original description: CDS=223-2043 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002862 No alias EC_3.2 glycosylase & original description: CDS=1-1968 0.04 OrthoFinder output from all 47 species
Sam_g13502 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g36019 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Solyc06g073750.4.1 Solyc06g073750 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
Spa_g07447 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11244 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03456 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012036_P002 Zm00001e012036 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR001764 Glyco_hydro_3_N 29 354
No external refs found!