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  5. AMTR_s02071p00000020

AMTR_s02071p00000020 (RPS7.1, RPS7,...)


Aliases : RPS7.1, RPS7, evm_27.TU.AmTr_v1.0_scaffold02071.1

Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS7 component


Gene families : OG0003075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003075_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s02071p00000020
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT2G07696 No alias Ribosomal protein S7p/S5e family protein 0.04 OrthoFinder output from all 47 species
ATCG00900 RPS7.1, RPS7 Ribosomal protein S7p/S5e family protein 0.03 OrthoFinder output from all 47 species
ATCG01240 RPS7.2 ribosomal protein S7 0.03 OrthoFinder output from all 47 species
ATMG01270 RPS7 mitochondrial ribosomal protein S7 0.04 OrthoFinder output from all 47 species
Aev_g27286 RPS7.1, RPS7 component *(uS7c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Aob_g13505 No alias component *(uS7m) of small mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aop_g15514 No alias component *(uS7m) of small mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Cba_g04878 RPS7.1, RPS7 component *(uS7c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ceric.05G043200.1 RPS7.1, RPS7,... component *(uS7c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ceric.09G049800.1 RPS7.1, RPS7,... component *(uS7c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ceric.18G054300.1 RPS7.1, RPS7,... component *(uS7c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ceric.22G078200.1 RPS7.1, RPS7,... component *(uS7c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ceric.29G003200.1 RPS7.1, RPS7,... component *(uS7c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ceric.33G038600.1 RPS7.1, RPS7,... component *(uS7c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ceric.36G044900.1 RPS7.1, RPS7,... component *(uS7c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Gb_04094 No alias Ribosomal protein S7, mitochondrial OS=Marchantia... 0.03 OrthoFinder output from all 47 species
Gb_26489 No alias Ribosomal protein S7, mitochondrial OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_37211 No alias Ribosomal protein S7, mitochondrial OS=Marchantia... 0.05 OrthoFinder output from all 47 species
LOC_Os12g34045.1 LOC_Os12g34045 component mtRPS7 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Lfl_g03137 RPS7.1, RPS7 component *(uS7c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Lfl_g06400 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0008535 respiratory chain complex IV assembly IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0031361 obsolete integral component of thylakoid membrane IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR023798 Ribosomal_S7_dom 1 125
No external refs found!