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  5. AMTR_s04023p00007260

AMTR_s04023p00007260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold04023.1

No description available


Gene families : OG0000205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s04023p00007260
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Aev_g02133 AGD11 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08071 CML43 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12844 CML42 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37168 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10823 CML43 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27706 CML42 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33734 UNE14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70312 UNE14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34640.t1 CML42, Aspi01Gene34640 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57526.t1 CML43, Aspi01Gene57526 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0143.g051443 UNE14 calcium sensor *(CML) & original description: CDS=1-462 0.01 OrthoFinder output from all 47 species
Ceric.04G108800.1 CML43, Ceric.04G108800 calcium sensor *(CML) & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g03398 CML42 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g37155 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015585001 UNE14 Calmodulin-like protein 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_28442 UNE14 Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_28443 UNE14 Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_30178 UNE14 Calmodulin-like protein 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g21380.2 CML42, LOC_Os03g21380 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os09g24580.1 LOC_Os09g24580 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10432950g0010 CML41 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_13199g0010 CML42 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_8749g0010 CML43 Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Nbi_g28765 CML43 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43110 AGD11 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20373 AGD11 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g21352 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g21574 CML42 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16755 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g03755 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g058170.1.1 Solyc04g058170 Probable calcium-binding protein CML44 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g49928 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e038252_P001 CML43, Zm00001e038252 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 57 84
No external refs found!