Aliases : evm_27.TU.AmTr_v1.0_scaffold04495.3
Description : Cellular respiration.oxidative phosphorylation.cytochrome c.CCM cytochrome c maturation system (system I).apocytochrome-heme assembly complex.CcmFn component
Gene families : OG0007669 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007669_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s04495p00005620 | |
| Cluster | HCCA: Cluster_18 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| ATMG00960 | CCB203 | Cytochrome C assembly protein | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g24797 | CCB382 | component *(CcmFn) of apocytochrome-heme assembly... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_15255 | CCB382 | component CcmFn of apocytochrome-heme assembly complex | 0.06 | OrthoFinder output from all 47 species | |
| Gb_21631 | CCB382 | component CcmFn of apocytochrome-heme assembly complex | 0.06 | OrthoFinder output from all 47 species | |
| Gb_33989 | CCB382 | component CcmFn of apocytochrome-heme assembly complex | 0.08 | OrthoFinder output from all 47 species | |
| Solyc00g049210.1.1 | CCB382, Solyc00g049210 | component CcmFn of apocytochrome-heme assembly complex | 0.03 | OrthoFinder output from all 47 species | |
| Solyc00g500249.1.1 | CCB382, Solyc00g500249 | component CcmFn of apocytochrome-heme assembly complex | 0.03 | OrthoFinder output from all 47 species | |
| Solyc00g500348.1.1 | CCB382, Solyc00g500348 | component CcmFn of apocytochrome-heme assembly complex | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g048130.3.1 | CCB382, Solyc10g048130 | component CcmFn of apocytochrome-heme assembly complex | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0008535 | respiratory chain complex IV assembly | IEA | Interproscan |
| CC | GO:0016020 | membrane | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003954 | NADH dehydrogenase activity | IEP | HCCA |
| MF | GO:0003955 | NAD(P)H dehydrogenase (quinone) activity | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| CC | GO:0009507 | chloroplast | IEP | HCCA |
| CC | GO:0009536 | plastid | IEP | HCCA |
| BP | GO:0009767 | photosynthetic electron transport chain | IEP | HCCA |
| BP | GO:0009772 | photosynthetic electron transport in photosystem II | IEP | HCCA |
| MF | GO:0015002 | obsolete heme-copper terminal oxidase activity | IEP | HCCA |
| MF | GO:0015453 | oxidoreduction-driven active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
| BP | GO:0019684 | photosynthesis, light reaction | IEP | HCCA |
| BP | GO:0022900 | electron transport chain | IEP | HCCA |
| BP | GO:0022904 | respiratory electron transport chain | IEP | HCCA |
| CC | GO:0031361 | obsolete integral component of thylakoid membrane | IEP | HCCA |
| BP | GO:0042773 | ATP synthesis coupled electron transport | IEP | HCCA |
| MF | GO:0045156 | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | IEP | HCCA |
| MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002541 | Cyt_c_assembly | 53 | 194 |
| No external refs found! |
