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  5. Aev_g07948

Aev_g07948


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g07948

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00075660 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
AT2G03380 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G06540 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g005601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g025491 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036520 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g15170 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08612.t1 Aspi01Gene08612 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10387.t1 REME1, Aspi01Gene10387 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44213.t1 Aspi01Gene44213 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56180.t1 EMB2758, Aspi01Gene56180 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009385 No alias not classified & original description: CDS=1-2319 0.04 OrthoFinder output from all 47 species
Azfi_s0032.g024769 OTP84 not classified & original description: CDS=1-2910 0.03 OrthoFinder output from all 47 species
Cba_g07743 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19787 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34742 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35085 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g38987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75269 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g77304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G068200.1 OTP86, Ceric.04G068200 not classified & original description: pacid=50632337... 0.04 OrthoFinder output from all 47 species
Ceric.05G087100.1 Ceric.05G087100 not classified & original description: pacid=50579181... 0.03 OrthoFinder output from all 47 species
Ceric.07G028700.1 Ceric.07G028700 not classified & original description: pacid=50626039... 0.04 OrthoFinder output from all 47 species
Ceric.22G044500.1 Ceric.22G044500 not classified & original description: pacid=50614334... 0.03 OrthoFinder output from all 47 species
Ceric.25G028400.1 Ceric.25G028400 not classified & original description: pacid=50594666... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g02827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35942 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17190 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38468 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50014 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g06719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14704 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01028747001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Gb_24633 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
LOC_Os03g41530.1 LOC_Os03g41530 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g64370.1 LOC_Os03g64370 Pentatricopeptide repeat-containing protein At5g52850,... 0.02 OrthoFinder output from all 47 species
LOC_Os05g45850.1 LOC_Os05g45850 Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
Len_g02423 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04103 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g13937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g38675 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07842 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10880 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g15292 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_7907g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Msp_g11341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25173 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36262 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18671 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g49137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63869 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20310 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20500 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g20514 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g22860 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23074 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23599 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g23600 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07560 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g40150 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53018 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002051 REME1 not classified & original description: CDS=1-1467 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004070 CRR22 not classified & original description: CDS=1-2127 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004386 No alias not classified & original description: CDS=1-2367 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010124 No alias ssDNA-binding protein *(OSB) & original description: CDS=208-2547 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013529 No alias ssDNA-binding protein *(OSB) & original description: CDS=539-3667 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015411 No alias not classified & original description: CDS=1-3726 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017463 No alias not classified & original description: CDS=1-2316 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022846 No alias not classified & original description: CDS=1-2226 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0198.g025550 No alias not classified & original description: CDS=1-2784 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0200.g025598 No alias not classified & original description: CDS=1-3840 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s3367.g028731 No alias not classified & original description: CDS=2473-3459 0.03 OrthoFinder output from all 47 species
Sam_g13864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16549 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18645 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g22475 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25325 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40196 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g40338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g43221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50768 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc04g079410.3.1 Solyc04g079410 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
Spa_g53142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14567 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20089 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22636 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46234 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016073 snRNA metabolic process IEP HCCA
BP GO:0016180 snRNA processing IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034472 snRNA 3'-end processing IEP HCCA
BP GO:0034477 U6 snRNA 3'-end processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 138 159
IPR002885 Pentatricopeptide_repeat 341 365
IPR002885 Pentatricopeptide_repeat 669 717
IPR002885 Pentatricopeptide_repeat 567 616
IPR002885 Pentatricopeptide_repeat 872 918
IPR002885 Pentatricopeptide_repeat 164 212
IPR002885 Pentatricopeptide_repeat 467 515
IPR002885 Pentatricopeptide_repeat 770 818
IPR002885 Pentatricopeptide_repeat 265 312
IPR002885 Pentatricopeptide_repeat 366 413
No external refs found!