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  5. Ppi_g00344

Ppi_g00344 (PAM68)


Aliases : PAM68

Description : protein involved in PS-II assembly *(PAM68) & original description: none


Gene families : OG0005725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005725_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g00344
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00088520 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
AT4G19100 PAM68 Protein of unknown function (DUF3464) 0.05 OrthoFinder output from all 47 species
AT5G52780 No alias Protein of unknown function (DUF3464) 0.02 OrthoFinder output from all 47 species
Adi_g112212 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.05 OrthoFinder output from all 47 species
Ala_g26970 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.03 OrthoFinder output from all 47 species
Aop_g00982 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene55602.t1 PAM68, Aspi01Gene55602 protein involved in PS-II assembly *(PAM68) & original... 0.03 OrthoFinder output from all 47 species
Ceric.26G045700.1 PAM68, Ceric.26G045700 protein involved in PS-II assembly *(PAM68) & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021759.13 PAM68 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Dcu_g28925 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01028843001 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
LOC_Os06g21530.1 PAM68, LOC_Os06g21530 PAM68 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
LOC_Os10g38910.1 LOC_Os10g38910 PAM68 protein involved in PS-II assembly 0.02 OrthoFinder output from all 47 species
MA_268175g0010 PAM68 PAM68 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
Msp_g02243 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.04 OrthoFinder output from all 47 species
Pir_g19463 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009124 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.04 OrthoFinder output from all 47 species
Sam_g13719 No alias protein involved in PS-II assembly *(PAM68) & original... 0.03 OrthoFinder output from all 47 species
Spa_g17043 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016851 magnesium chelatase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP HCCA
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR021855 PAM68-like 69 184
No external refs found!