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  5. Ppi_g01254

Ppi_g01254 (MBD05, MBD5, ATMBD5)


Aliases : MBD05, MBD5, ATMBD5

Description : methylation reader *(MBD5-6) & original description: none


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g01254

Target Alias Description ECC score Gene Family Method Actions
Als_g11443 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55862.t1 MBD05, MBD5,... methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0158.g053875 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: CDS=259-3537 0.03 OrthoFinder output from all 47 species
Cba_g30007 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G019600.1 ATMBD6, MBD6,... not classified & original description: pacid=50637929... 0.04 OrthoFinder output from all 47 species
Ceric.21G081800.1 ATMBD6, MBD6,... methylation reader *(MBD5-6) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.32G024300.1 Ceric.32G024300 methylation reader *(MBD5-6) & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g07073 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06705 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025031001 ATMBD7, MBD7 Chromatin organisation.DNA methylation.ROS1-mediated DNA... 0.02 OrthoFinder output from all 47 species
MA_411073g0010 MBD05, MBD5, ATMBD5 methylation reader (MBD5-6) 0.02 OrthoFinder output from all 47 species
MA_77012g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g22182 ATMBD6, MBD6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19770 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06715 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26183 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02100 No alias methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 392 444
No external refs found!