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  5. Ppi_g01698

Ppi_g01698 (RBCS1A)


Aliases : RBCS1A

Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer & original description: none


Gene families : OG0000735 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000735_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g01698
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Aop_g68980 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Aspi01Gene02941.t1 RBCS1A, Aspi01Gene02941 small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Azfi_s0149.g053208 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Ceric.09G051000.1 RBCS1A, Ceric.09G051000 small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Ceric.25G070600.1 RBCS1A, Ceric.25G070600 small subunit of ribulose-1,5-bisphosphat... 0.06 OrthoFinder output from all 47 species
Ceric.28G015900.1 RBCS1A, Ceric.28G015900 small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Dde_g46369 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.06 OrthoFinder output from all 47 species
Len_g48939 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Lfl_g32549 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Mp4g05990.1 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Mp4g06040.1 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Mp4g09890.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Msp_g43344 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Msp_g43345 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.07 OrthoFinder output from all 47 species
Nbi_g30940 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Pp3c4_11770V3.1 RBCS1A, Pp3c4_11770 Ribulose bisphosphate carboxylase (small chain) family protein 0.02 OrthoFinder output from all 47 species
Pp3c4_13260V3.1 RBCS1A, Pp3c4_13260 Ribulose bisphosphate carboxylase (small chain) family protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015406 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Smo147927 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004312 fatty acid synthase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0009922 fatty acid elongase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000894 RuBisCO_ssu_dom 60 167
No external refs found!