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  5. Ppi_g01736

Ppi_g01736 (HVA22F)


Aliases : HVA22F

Description : not classified & original description: none


Gene families : OG0000842 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000842_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g01736
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00257430 ATHVA22A,... HVA22-like protein a OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G62490 ATHVA22B, HVA22B HVA22 homologue B 0.02 OrthoFinder output from all 47 species
Als_g11936 HVA22F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g31720 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G053300.1 HVA22F, Ceric.08G053300 not classified & original description: pacid=50637741... 0.04 OrthoFinder output from all 47 species
Cre03.g176930 HVA22D, ATHVA22D No description available 0.02 OrthoFinder output from all 47 species
Dac_g04865 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008576001 HVA22E, ATHVA22E HVA22-like protein e OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Nbi_g10087 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04158 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g50646 HVA22F not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g014420.4.1 HVA22E,... Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 117.0) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR004345 TB2_DP1_HVA22 89 163
No external refs found!