Ppi_g02788


Description : not classified & original description: none


Gene families : OG0005276 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005276_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g02788
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
Adi_g058804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g111387 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0157.g053785 No alias not classified & original description: CDS=31-933 0.08 OrthoFinder output from all 47 species
Dac_g08843 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g00955 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os10g41940.1 LOC_Os10g41940 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g02709 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19843 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g12514 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001047 No alias not classified & original description: CDS=58-897 0.02 OrthoFinder output from all 47 species
Sam_g09480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!