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  5. Ppi_g02809

Ppi_g02809


Description : component *(uL18c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0005910 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005910_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g02809

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00209880 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.08 OrthoFinder output from all 47 species
AT1G48350 No alias Ribosomal L18p/L5e family protein 0.04 OrthoFinder output from all 47 species
Adi_g001890 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aev_g28610 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ala_g00228 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aob_g03843 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aop_g20657 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Cba_g10879 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ceric.13G022200.1 Ceric.13G022200 component *(uL18c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Cre01.g052100 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Dac_g05557 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Dcu_g21381 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g31625 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Dde_g24129 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ehy_g02012 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01017720001 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Gb_12756 No alias component psRPL18 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
LOC_Os03g61260.1 LOC_Os03g61260 component psRPL18 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Len_g30980 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
MA_7609850g0010 No alias 50S ribosomal protein L18, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp6g08500.1 No alias component psRPL18 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Msp_g22178 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Nbi_g15098 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ore_g07264 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ore_g07265 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017759 No alias EC_3.2 glycosylase & original description: CDS=437-952 0.07 OrthoFinder output from all 47 species
Sam_g19670 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Sam_g45370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc12g098890.2.1 Solyc12g098890 component psRPL18 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Spa_g00581 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Zm00001e006246_P001 Zm00001e006246 component psRPL18 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR005484 Ribosomal_L18 47 165
No external refs found!