Ppi_g04645


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g04645

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00252800 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.02 OrthoFinder output from all 47 species
AT1G15510 VAC1, ECB2, ATECB2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G03800 emb1899, EMB175, EMB166 Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g004298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g026204 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g033689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080167 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g097754 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17868 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06300 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21469 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07448 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14144 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15487 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30841 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18957 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27898 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14256.t1 Aspi01Gene14256 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22419.t1 Aspi01Gene22419 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32959.t1 Aspi01Gene32959 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0012.g012913 No alias not classified & original description: CDS=1-2943 0.02 OrthoFinder output from all 47 species
Azfi_s0114.g046172 No alias not classified & original description: CDS=1-2679 0.03 OrthoFinder output from all 47 species
Cba_g02684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07753 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g11358 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36067 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G010800.1 Ceric.02G010800 not classified & original description: pacid=50584420... 0.03 OrthoFinder output from all 47 species
Ceric.02G071100.1 Ceric.02G071100 not classified & original description: pacid=50585515... 0.04 OrthoFinder output from all 47 species
Ceric.03G027500.1 Ceric.03G027500 not classified & original description: pacid=50572299... 0.03 OrthoFinder output from all 47 species
Ceric.06G003600.1 Ceric.06G003600 not classified & original description: pacid=50620322... 0.03 OrthoFinder output from all 47 species
Ceric.06G069000.1 Ceric.06G069000 not classified & original description: pacid=50620210... 0.03 OrthoFinder output from all 47 species
Ceric.07G035900.1 Ceric.07G035900 not classified & original description: pacid=50625961... 0.03 OrthoFinder output from all 47 species
Ceric.07G041800.1 Ceric.07G041800 not classified & original description: pacid=50626255... 0.03 OrthoFinder output from all 47 species
Ceric.10G062000.1 Ceric.10G062000 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G040900.1 Ceric.11G040900 not classified & original description: pacid=50596742... 0.03 OrthoFinder output from all 47 species
Ceric.13G010300.1 Ceric.13G010300 not classified & original description: pacid=50636329... 0.03 OrthoFinder output from all 47 species
Ceric.13G049100.1 Ceric.13G049100 not classified & original description: pacid=50635384... 0.03 OrthoFinder output from all 47 species
Ceric.18G069700.1 CRR2, Ceric.18G069700 not classified & original description: pacid=50622363... 0.03 OrthoFinder output from all 47 species
Ceric.1Z079200.1 CRR22, Ceric.1Z079200 not classified & original description: pacid=50582193... 0.04 OrthoFinder output from all 47 species
Ceric.21G042400.1 Ceric.21G042400 not classified & original description: pacid=50602832... 0.02 OrthoFinder output from all 47 species
Ceric.23G046500.1 Ceric.23G046500 not classified & original description: pacid=50610423... 0.03 OrthoFinder output from all 47 species
Ceric.25G036300.1 Ceric.25G036300 not classified & original description: pacid=50594016... 0.03 OrthoFinder output from all 47 species
Ceric.28G055900.1 Ceric.28G055900 not classified & original description: pacid=50569676... 0.03 OrthoFinder output from all 47 species
Ceric.29G055100.1 Ceric.29G055100 not classified & original description: pacid=50625141... 0.03 OrthoFinder output from all 47 species
Ceric.30G007900.1 Ceric.30G007900 not classified & original description: pacid=50608292... 0.03 OrthoFinder output from all 47 species
Ceric.31G027200.1 OTP86, Ceric.31G027200 not classified & original description: pacid=50574199... 0.02 OrthoFinder output from all 47 species
Ceric.39G043600.1 Ceric.39G043600 not classified & original description: pacid=50582616... 0.03 OrthoFinder output from all 47 species
Dac_g18942 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g45442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08313 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12504 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g24332 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02806 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02935 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03951 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03967 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05785 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g08678 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09537 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09819 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16079 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17941 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21664 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21829 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21844 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22647 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25446 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26709 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g38992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g41493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g43708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029382001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01032721001 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species
Gb_13980 OSB1 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
LOC_Os06g48660.1 LOC_Os06g48660 Pentatricopeptide repeat-containing protein At4g14820... 0.02 OrthoFinder output from all 47 species
LOC_Os10g34720.1 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os11g17530.2 LOC_Os11g17530 Pentatricopeptide repeat-containing protein At2g37320... 0.02 OrthoFinder output from all 47 species
LOC_Os11g45410.1 LOC_Os11g45410 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Len_g03910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g12672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17769 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23070 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g39568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07412 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09759 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11894 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12137 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_138676g0010 EMB2261 RNA editing factor (ECD1) 0.02 OrthoFinder output from all 47 species
MA_187514g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_34492g0020 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_376862g0010 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Msp_g24535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26664 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28092 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48629 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16471 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g42294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g44624 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13573 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43031 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57955 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g59601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63640 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63883 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03155 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000052 EMB2758 not classified & original description: CDS=1-1683 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017463 No alias not classified & original description: CDS=1-2316 0.03 OrthoFinder output from all 47 species
Sam_g16206 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo130540 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Smo26993 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Smo74388 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Smo77340 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Smo92492 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Spa_g08436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30384 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g43840 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23273 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g34886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35636 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007462_P001 Zm00001e007462 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e015440_P001 CRR22, Zm00001e015440 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Zm00001e020442_P001 Zm00001e020442 Pentatricopeptide repeat-containing protein At4g21300... 0.02 OrthoFinder output from all 47 species
Zm00001e041048_P001 OTP86, Zm00001e041048 RNA editing factor (OTP86) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 484 504
IPR002885 Pentatricopeptide_repeat 282 305
IPR002885 Pentatricopeptide_repeat 210 235
IPR032867 DYW_dom 844 921
IPR002885 Pentatricopeptide_repeat 408 455
IPR002885 Pentatricopeptide_repeat 510 557
IPR002885 Pentatricopeptide_repeat 307 355
IPR002885 Pentatricopeptide_repeat 610 658
No external refs found!