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  5. Ppi_g04692

Ppi_g04692


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g04692

Target Alias Description ECC score Gene Family Method Actions
Adi_g012952 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035943 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g052414 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060857 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11263 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g17771 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g25067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44555 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g44730 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g36539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g25768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26561 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37094 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g27463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0003.g007938 No alias not classified & original description: CDS=1-4179 0.03 OrthoFinder output from all 47 species
Azfi_s0009.g012008 EMB2758 not classified & original description: CDS=1-2031 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012358 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2001 0.02 OrthoFinder output from all 47 species
Azfi_s0012.g012931 No alias not classified & original description: CDS=1-3024 0.02 OrthoFinder output from all 47 species
Azfi_s0037.g025886 No alias not classified & original description: CDS=1-2634 0.03 OrthoFinder output from all 47 species
Azfi_s0039.g026394 OTP86 not classified & original description: CDS=1-2238 0.03 OrthoFinder output from all 47 species
Azfi_s0083.g038880 No alias not classified & original description: CDS=1-2250 0.02 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.01 OrthoFinder output from all 47 species
Cba_g00281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19545 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g35174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75350 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g75400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G034000.1 OTP84, Ceric.02G034000 not classified & original description: pacid=50585959... 0.04 OrthoFinder output from all 47 species
Ceric.06G074600.1 Ceric.06G074600 not classified & original description: pacid=50619733... 0.01 OrthoFinder output from all 47 species
Dac_g19068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21324 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g46395 EMB2758 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g50140 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12887 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26396 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g42280.1 CRR21, LOC_Os01g42280 RNA editing factor (CRR21) 0.02 OrthoFinder output from all 47 species
LOC_Os09g07780.1 OTP84, LOC_Os09g07780 Pentatricopeptide repeat-containing protein At3g57430,... 0.01 OrthoFinder output from all 47 species
Len_g05357 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g09267 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g21008 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24736 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26316 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g26317 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03305 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05438 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06003 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07817 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08499 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g32907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_82569g0020 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Msp_g03935 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28092 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g28724 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g46088 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18275 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g28118 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g28131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16979 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35928 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000452 No alias not classified & original description: CDS=1-2067 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006560 No alias not classified & original description: CDS=1-2253 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007869 No alias not classified & original description: CDS=1-2253 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012385 No alias not classified & original description: CDS=1-1908 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013068 No alias not classified & original description: CDS=1-1464 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013077 No alias not classified & original description: CDS=1-438 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0215.g026034 OTP84 not classified & original description: CDS=2081-4369 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0260.g026882 No alias not classified & original description: CDS=1-687 0.02 OrthoFinder output from all 47 species
Sam_g51209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g009500.1.1 Solyc06g009500 Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Solyc07g062820.1.1 Solyc07g062820 RNA editing factor (SEL1/PDM1) 0.02 OrthoFinder output from all 47 species
Spa_g04791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13913 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16324 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22704 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23700 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26791 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50395 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55590 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55598 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56147 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g57370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02687 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g09161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g16670 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g22996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43995 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 274 321
IPR002885 Pentatricopeptide_repeat 914 961
IPR002885 Pentatricopeptide_repeat 1018 1062
IPR002885 Pentatricopeptide_repeat 374 422
IPR002885 Pentatricopeptide_repeat 677 724
IPR002885 Pentatricopeptide_repeat 551 574
IPR002885 Pentatricopeptide_repeat 451 474
IPR002885 Pentatricopeptide_repeat 1095 1118
IPR002885 Pentatricopeptide_repeat 248 268
IPR002885 Pentatricopeptide_repeat 74 102
IPR002885 Pentatricopeptide_repeat 579 607
IPR002885 Pentatricopeptide_repeat 752 778
IPR002885 Pentatricopeptide_repeat 882 911
IPR002885 Pentatricopeptide_repeat 781 810
IPR002885 Pentatricopeptide_repeat 479 508
IPR002885 Pentatricopeptide_repeat 175 205
No external refs found!