Aliases : AMSH1
Description : deubiquitinase *(AMSH) & original description: none
Gene families : OG0001591 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001591_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ppi_g05194 | |
| Cluster | HCCA: Cluster_145 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G48790 | AMSH1 | associated molecule with the SH3 domain of STAM 1 | 0.02 | OrthoFinder output from all 47 species | |
| AT4G16144 | AMSH3 | associated molecule with the SH3 domain of STAM 3 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0212.g058161 | AMSH1 | deubiquitinase *(AMSH) & original description: CDS=85-1446 | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000248.12 | AMSH2 | Vesicle trafficking.endomembrane trafficking.protein... | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os01g23640.1 | AMSH1, LOC_Os01g23640 | deubiquitinase (AMSH) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g07321 | AMSH1 | deubiquitinase *(AMSH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g09618 | AMSH1 | deubiquitinase *(AMSH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g01316 | AMSH1 | deubiquitinase *(AMSH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23092 | AMSH1 | deubiquitinase *(AMSH) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0139.g022666 | AMSH1 | deubiquitinase *(AMSH) & original description: CDS=122-1471 | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| MF | GO:0008233 | peptidase activity | IEA | Interproscan |
| MF | GO:0008237 | metallopeptidase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0005048 | signal sequence binding | IEP | HCCA |
| MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005856 | cytoskeleton | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0006621 | protein retention in ER lumen | IEP | HCCA |
| BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0016759 | cellulose synthase activity | IEP | HCCA |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | HCCA |
| MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
| BP | GO:0030243 | cellulose metabolic process | IEP | HCCA |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | HCCA |
| MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | HCCA |
| MF | GO:0033218 | amide binding | IEP | HCCA |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | HCCA |
| MF | GO:0042277 | peptide binding | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0045185 | maintenance of protein location | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| MF | GO:0046923 | ER retention sequence binding | IEP | HCCA |
| BP | GO:0051235 | maintenance of location | IEP | HCCA |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
| BP | GO:0051651 | maintenance of location in cell | IEP | HCCA |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
| MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
| No external refs found! |
