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  5. Ppi_g05278

Ppi_g05278 (CNGC15, ATCNGC15)


Aliases : CNGC15, ATCNGC15

Description : cyclic nucleotide-gated cation channel *(CNGC) & original description: none


Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g05278
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00268470 ATCNGC14,... Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00155680 ATCNGC20,... Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
Aev_g08257 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
Aob_g09063 CNGC5, ATCNGC5 cyclic nucleotide-gated cation channel *(CNGC) &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene20301.t1 ATCNGC20,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g20415 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Dac_g22042 DND2, CNGC4,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Dde_g01692 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
GSVIVT01032309001 ATCNGC17, CNGC17 Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
LOC_Os06g33570.1 ATCNGC1, CNGC1,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Lfl_g40461 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.05 OrthoFinder output from all 47 species
Ore_g19477 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
Pp3c15_18460V3.1 Pp3c15_18460 cyclic nucleotide-gated cation channel 4 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021222 ATCNGC20, CNGC20, CNBT1 phytochrome photoreceptor *(PHY) & original description:... 0.04 OrthoFinder output from all 47 species
Zm00001e024846_P003 ATCNGC1, CNGC1,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 88 411
No external refs found!