Ppi_g05304


Description : component *(NFRKB1) of INO80 chromatin remodeling complex & original description: none


Gene families : OG0001406 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001406_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g05304

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00182890 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G02290 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
AT3G45830 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Adi_g016710 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Adi_g105453 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Adi_g113325 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Ceric.04G027000.1 Ceric.04G027000 component *(NFRKB1) of INO80 chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Ceric.20G007800.1 Ceric.20G007800 component *(NFRKB1) of INO80 chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000237.41 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g22056 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Dde_g21319 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.03 OrthoFinder output from all 47 species
GSVIVT01025073001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_27287 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g02680.1 LOC_Os05g02680 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g14657 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Pir_g13602 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Pnu_g03027 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Pnu_g08109 No alias component *(NFRKB2) of INO80 chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Sam_g08339 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Smo90858 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc11g072810.2.1 Solyc11g072810 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g47099 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!