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  5. Ppi_g06672

Ppi_g06672 (ATTRX1, ATTRX H1, TRX1)


Aliases : ATTRX1, ATTRX H1, TRX1

Description : H-type thioredoxin *(Trx-H) & original description: none


Gene families : OG0000082 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g06672
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT5G39950 TRXH2, TRX2,... thioredoxin 2 0.03 OrthoFinder output from all 47 species
Adi_g028432 ATTRX4, ATH4 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076044 ATH9, TH9, TRX H9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g15874 ATTRX4, ATH4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08816 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09819 ATTRX4, ATH4 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25048 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36127 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36385 ATH5, ATTRX5, TRX5, LIV1 H-type thioredoxin *(Trx-H) & original description: none 0.08 OrthoFinder output from all 47 species
Als_g24387 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.1 OrthoFinder output from all 47 species
Als_g56864 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g15329 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15807 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g18955 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g29083 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.1 OrthoFinder output from all 47 species
Cba_g39941 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g65877 ATTRX4, ATH4 H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67598 ATTRX3, ATTRXH3,... H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42380 ATH5, ATTRX5, TRX5, LIV1 H-type thioredoxin *(Trx-H) & original description: none 0.09 OrthoFinder output from all 47 species
Dac_g46067 TRXH2, TRX2,... not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dcu_g23481 ATTRX4, ATH4 H-type thioredoxin *(Trx-H) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g44237 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g44249 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g44913 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g17941 TRXH2, TRX2,... not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g37993 ATTRX4, ATH4 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g47348 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g43550 ATHM2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05540 TRXH2, TRX2,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g25781 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g37860 TRXF2, ATF2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g52760 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56673 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g16418 ATH5, ATTRX5, TRX5, LIV1 H-type thioredoxin *(Trx-H) & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 67 163
No external refs found!