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  5. Ppi_g06999

Ppi_g06999


Description : regulatory protein *(TMS) of vesicle trafficking & original description: none


Gene families : OG0002049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g06999

Target Alias Description ECC score Gene Family Method Actions
AT5G05570 No alias transducin family protein / WD-40 repeat family protein 0.03 OrthoFinder output from all 47 species
Adi_g082393 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g083853 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.05 OrthoFinder output from all 47 species
Aev_g38895 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.02 OrthoFinder output from all 47 species
Aob_g25755 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene53139.t1 Aspi01Gene53139 regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Ceric.04G073600.1 Ceric.04G073600 regulatory protein *(TMS) of vesicle trafficking &... 0.04 OrthoFinder output from all 47 species
Dcu_g05823 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.04 OrthoFinder output from all 47 species
Lfl_g02377 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.05 OrthoFinder output from all 47 species
MA_1162212g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_7753240g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8863348g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp8g09160.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g29227 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.04 OrthoFinder output from all 47 species
Smo413341 No alias No description available 0.05 OrthoFinder output from all 47 species
Zm00001e035944_P002 Zm00001e035944 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
CC GO:0070531 BRCA1-A complex IEP HCCA
CC GO:0070552 BRISC complex IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR042855 V_SNARE_CC 1046 1091
IPR001680 WD40_repeat 479 503
No external refs found!