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  5. Ppi_g07616

Ppi_g07616 (ATSS4, SS4, SSIV)


Aliases : ATSS4, SS4, SSIV

Description : starch synthase *(SS4) & original description: none


Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g07616

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00214840 ATSS4, SS4,... Probable starch synthase 4, chloroplastic/amyloplastic... 0.03 OrthoFinder output from all 47 species
AT4G18240 ATSS4, SS4, SSIV starch synthase 4 0.05 OrthoFinder output from all 47 species
Adi_g087898 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g25563 ATSS4, SS4, SSIV not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g02616 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11092 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05284 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000667 ATSS4, SS4, SSIV not classified & original description: CDS=177-2066 0.03 OrthoFinder output from all 47 species
Cba_g18815 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26958 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g33306 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G125000.1 ATSS4, SS4,... starch synthase *(SS4) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.18G020900.1 ATSS3, SS3,... starch synthase *(SS3) & original description:... 0.05 OrthoFinder output from all 47 species
Cre06.g282000 ATSS3, SS3 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Cre13.g579598 ATSS3, SS3 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Dcu_g08981 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g43255 ATSS4, SS4, SSIV not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20658 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g49747 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g04240 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g08030.1 ATSS4, SS4, SSIV Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 OrthoFinder output from all 47 species
Nbi_g34784 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39876 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g51044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027473_P001 ATSS4, SS4,... starch synthase (SSIV) 0.03 OrthoFinder output from all 47 species
Zm00001e041682_P002 ATSS3, SS3,... starch synthase (SSIII) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 836 993
IPR013534 Starch_synth_cat_dom 542 781
No external refs found!