Ppi_g08233

Description : transcription factor *(DOF) & original description: none

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g08233

Target	Alias	Description	ECC score	Gene Family Method
AT5G65590	No alias	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
Adi_g074898	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g04622	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g38452	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene66334.t1	TMO6, Aspi01Gene66334	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.20G020200.1	CDF1, Ceric.20G020200	transcription factor *(DOF) & original description:...	0.04	OrthoFinder output from all 47 species
Dde_g29870	OBP4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g25269	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g27889	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g28279	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01021085001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
LOC_Os02g15350.1	LOC_Os02g15350	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os08g38220.1	LOC_Os08g38220	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os09g29960.1	ADOF2, DOF2,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Len_g13575	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Len_g54993	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g17744	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g27554	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
MA_123810g0010	OBP4	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Msp_g25677	DAG1	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g05506	No alias	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g06441	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g10910	CDF1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012870	TMO6	transcription factor *(DOF) & original description: CDS=1-1464	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013517	CDF3	transcription factor *(DOF) & original description: CDS=154-1659	0.03	OrthoFinder output from all 47 species
Solyc03g121400.1.1	ADOF2, DOF2,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc06g062520.1.1	ADOF1, DOF1,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e010022_P001	OBP1, Zm00001e010022	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e041944_P001	Zm00001e041944	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	95	152

External Links

No external refs found!

Ppi_g08233

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation