Ppi_g08844 (TUB8)

Aliases : TUB8

Description : beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer & original description: none

Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g08844
Cluster	HCCA: Cluster_52

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00255970	TUB8,...	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
AMTR_s00025p00193020	evm_27.TU.AmTr_v1...	Tubulin beta chain OS=Polytomella agilis	0.02	OrthoFinder output from all 47 species
AMTR_s00101p00135960	TUB6	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
AT1G75780	TUB1	tubulin beta-1 chain	0.02	OrthoFinder output from all 47 species
AT5G23860	TUB8	tubulin beta 8	0.02	OrthoFinder output from all 47 species
Adi_g107584	TUB2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g54930	TUB7	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Aspi01Gene31396.t1	TUB1, Aspi01Gene31396	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Aspi01Gene49065.t1	TUB2, Aspi01Gene49065	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Cba_g06846	TUB8	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g15537	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Cba_g69323	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Ceric.06G048500.1	TUB2, Ceric.06G048500	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Ceric.07G056800.1	TUB6, Ceric.07G056800	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Ceric.19G036600.1	TUB6, Ceric.19G036600	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Ceric.27G053100.1	TUB6, Ceric.27G053100	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Dcu_g05390	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Dcu_g31279	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Dcu_g45223	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.1	OrthoFinder output from all 47 species
Gb_22609	TUB6	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.04	OrthoFinder output from all 47 species
Gb_29799	TUB6	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.05	OrthoFinder output from all 47 species
Gb_30905	TUB6	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.04	OrthoFinder output from all 47 species
LOC_Os01g59150.1	TUB6, LOC_Os01g59150	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.02	OrthoFinder output from all 47 species
Len_g52480	TUB2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Mp2g00620.1	TUB2	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.02	OrthoFinder output from all 47 species
Msp_g09508	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Msp_g39204	TUB8	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g28777	TUB6	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022789	TUB6	not classified & original description: CDS=157-1053	0.03	OrthoFinder output from all 47 species
Smo183654	TUB6	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Smo266715	TUB6	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Solyc10g080940.3.1	TUB6, Solyc10g080940	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
Zm00001e022571_P001	TUB6, Zm00001e022571	Tubulin beta-4 chain OS=Eleusine indica...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0042393	histone binding	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	189	228
IPR003008	Tubulin_FtsZ_GTPase	3	139

External Links

No external refs found!

Ppi_g08844 (TUB8)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation