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  5. Ppi_g08864

Ppi_g08864


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g08864

Target Alias Description ECC score Gene Family Method Actions
AT3G16610 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 OrthoFinder output from all 47 species
AT3G49740 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G03800 emb1899, EMB175, EMB166 Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g005549 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05187 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22525.t1 REME1, Aspi01Gene22525 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34796.t1 EMB2758, Aspi01Gene34796 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36242.t1 VAC1, ECB2,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0059.g034666 No alias not classified & original description: CDS=1-1770 0.03 OrthoFinder output from all 47 species
Cba_g31685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G071400.1 Ceric.02G071400 not classified & original description: pacid=50584970... 0.03 OrthoFinder output from all 47 species
Ceric.05G087100.1 Ceric.05G087100 not classified & original description: pacid=50579181... 0.02 OrthoFinder output from all 47 species
Ceric.10G043800.1 Ceric.10G043800 not classified & original description: pacid=50613534... 0.02 OrthoFinder output from all 47 species
Ceric.18G083800.1 Ceric.18G083800 not classified & original description: pacid=50622461... 0.03 OrthoFinder output from all 47 species
Ceric.19G064200.1 MEF19, Ceric.19G064200 not classified & original description: pacid=50576611... 0.03 OrthoFinder output from all 47 species
Ceric.1Z254100.1 Ceric.1Z254100 not classified & original description: pacid=50632850... 0.03 OrthoFinder output from all 47 species
Ceric.23G032000.1 Ceric.23G032000 not classified & original description: pacid=50611416... 0.03 OrthoFinder output from all 47 species
Ceric.34G000500.1 Ceric.34G000500 not classified & original description: pacid=50623432... 0.03 OrthoFinder output from all 47 species
Dac_g04642 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31222 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g36005 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38568 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09513 MEF21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05108 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16392 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22351 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g38179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g49917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007972001 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Len_g04823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10511 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g34158 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g41147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07416 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03151 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g21816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63813 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27694 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008203 OTP86 not classified & original description: CDS=1-2439 0.03 OrthoFinder output from all 47 species
Sam_g12246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16664 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo134463 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Solyc03g114660.1.1 Solyc03g114660 Pentatricopeptide repeat-containing protein At1g18485... 0.02 OrthoFinder output from all 47 species
Solyc09g090440.1.1 LPA66, Solyc09g090440 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Tin_g04113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0010011 auxin binding IEP HCCA
MF GO:0042562 hormone binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 149 169
IPR002885 Pentatricopeptide_repeat 49 75
IPR002885 Pentatricopeptide_repeat 654 676
IPR002885 Pentatricopeptide_repeat 250 271
IPR002885 Pentatricopeptide_repeat 278 304
IPR002885 Pentatricopeptide_repeat 351 374
IPR002885 Pentatricopeptide_repeat 381 409
IPR002885 Pentatricopeptide_repeat 754 778
IPR002885 Pentatricopeptide_repeat 581 606
IPR002885 Pentatricopeptide_repeat 480 510
IPR002885 Pentatricopeptide_repeat 683 712
IPR002885 Pentatricopeptide_repeat 175 221
No external refs found!