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  5. Ppi_g09458

Ppi_g09458


Description : component *(PsbW) of PS-II complex & original description: none


Gene families : OG0002050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002050_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g09458

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00266120 PSBW,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.02 OrthoFinder output from all 47 species
AT2G30570 PSBW photosystem II reaction center W 0.05 OrthoFinder output from all 47 species
GSVIVT01000743001 PSBW Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.03 OrthoFinder output from all 47 species
LOC_Os01g56680.2 PSBW, LOC_Os01g56680 component PsbW of PS-II complex 0.03 OrthoFinder output from all 47 species
Lfl_g09117 No alias component *(PsbW) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Mp5g14190.1 PSBW component PsbW of PS-II complex 0.04 OrthoFinder output from all 47 species
Pnu_g33298 No alias component *(PsbW) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Pp3c18_6770V3.1 PSBW, Pp3c18_6770 photosystem II reaction center W 0.01 OrthoFinder output from all 47 species
Pp3c22_16330V3.1 PSBW, Pp3c22_16330 photosystem II reaction center W 0.01 OrthoFinder output from all 47 species
Ppi_g25239 No alias component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g27961 No alias component *(PsbW) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Solyc06g084050.4.1 PSBW, Solyc06g084050 component PsbW of PS-II complex 0.02 OrthoFinder output from all 47 species
Zm00001e019660_P002 PSBW, Zm00001e019660 component PsbW of PS-II complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009806 PSII_PsbW_class2 30 147
No external refs found!