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  5. Ppi_g09676

Ppi_g09676 (LBD20)


Aliases : LBD20

Description : AS2/LOB-type transcription factor & original description: none


Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g09676
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00187850 LBD2,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.06 OrthoFinder output from all 47 species
AMTR_s00058p00148530 LBD11,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.01 OrthoFinder output from all 47 species
AMTR_s00076p00127530 LBD4,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
AMTR_s00184p00044240 LBD4,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
AT1G06280 LBD2 LOB domain-containing protein 2 0.06 OrthoFinder output from all 47 species
AT1G07900 LBD1 LOB domain-containing protein 1 0.03 OrthoFinder output from all 47 species
AT1G31320 LBD4 LOB domain-containing protein 4 0.02 OrthoFinder output from all 47 species
AT1G65620 AS2 Lateral organ boundaries (LOB) domain family protein 0.06 OrthoFinder output from all 47 species
AT2G28500 LBD11 LOB domain-containing protein 11 0.03 OrthoFinder output from all 47 species
AT2G31310 LBD14 LOB domain-containing protein 14 0.03 OrthoFinder output from all 47 species
AT2G40470 LBD15, ASL11 LOB domain-containing protein 15 0.03 OrthoFinder output from all 47 species
AT3G03760 LBD20 LOB domain-containing protein 20 0.06 OrthoFinder output from all 47 species
AT3G13850 LBD22 LOB domain-containing protein 22 0.03 OrthoFinder output from all 47 species
AT3G27650 LBD25 LOB domain-containing protein 25 0.01 OrthoFinder output from all 47 species
AT4G00220 LBD30, JLO Lateral organ boundaries (LOB) domain family protein 0.04 OrthoFinder output from all 47 species
AT5G63090 LOB Lateral organ boundaries (LOB) domain family protein 0.03 OrthoFinder output from all 47 species
Adi_g116107 LBD20 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38835 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27434 LBD25 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g29995 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23864 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68836 LBD20 AS2/LOB-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene12790.t1 LBD4, Aspi01Gene12790 AS2/LOB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene18506.t1 LBD29, ASL16,... AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29461.t1 LOB, Aspi01Gene29461 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43918.t1 LBD15, ASL11,... AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65362.t1 AS2, Aspi01Gene65362 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0072.g037067 LBD4 AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037915 LBD20 AS2/LOB-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g45920 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G082500.1 LOB, Ceric.01G082500 AS2/LOB-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.02G060200.1 LBD15, ASL11,... AS2/LOB-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.14G090000.1 LBD20, Ceric.14G090000 AS2/LOB-type transcription factor & original... 0.08 OrthoFinder output from all 47 species
Ceric.20G046600.1 Ceric.20G046600 not classified & original description: pacid=50566224... 0.04 OrthoFinder output from all 47 species
Dcu_g09508 AS2 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46233 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46319 LBD20 AS2/LOB-type transcription factor & original description: none 0.15 OrthoFinder output from all 47 species
GSVIVT01003546001 LBD10 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 OrthoFinder output from all 47 species
GSVIVT01003547001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 OrthoFinder output from all 47 species
GSVIVT01004323001 ASL1, LBD36 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 OrthoFinder output from all 47 species
GSVIVT01006269001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 OrthoFinder output from all 47 species
GSVIVT01029979001 LBD20 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 OrthoFinder output from all 47 species
GSVIVT01032592001 LBD27, SCP RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
GSVIVT01032714001 LBD15, ASL11 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
Gb_14010 LBD20 transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
Gb_19390 LBD4 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Gb_20676 LBD1 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Gb_23688 LBD15, ASL11 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Gb_25346 LBD4 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Gb_29853 LBD4 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Gb_39343 LBD20 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Gb_40767 LBD15, ASL11 transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
LOC_Os01g07480.2 LOB, LOC_Os01g07480 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g14030.1 LBD2, LOC_Os01g14030 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
LOC_Os01g56530.1 LBD20, LOC_Os01g56530 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g05500.1 LBD29, ASL16,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g17810.1 LBD11, LOC_Os03g17810 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g41600.1 ASL1, LBD36,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
LOC_Os10g07510.1 LBD18, LOC_Os10g07510 transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
Len_g16017 AS2 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55694 LBD20 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434193g0010 LBD1 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
MA_126761g0010 LBD20 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
MA_16646g0010 LBD27, SCP transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
MA_292200g0010 LBD11 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
MA_41152g0010 LBD4 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
MA_445236g0010 LBD1 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
MA_9839150g0010 LBD1 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Msp_g44922 LBD20 AS2/LOB-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g08077 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38666 LBD4 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08471 AS2 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40723 AS2 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42900 LBD20 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42913 LBD27, SCP AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43400 LBD22 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43401 No alias AS2/LOB-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g43402 LBD22 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g30887 LBD4 AS2/LOB-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g56591 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22342 LBD27, SCP AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g24707 LBD22 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25313 AS2 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26733 LBD20 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020253 AS2 AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020470 LOB AS2/LOB-type transcription factor & original... 0.06 OrthoFinder output from all 47 species
Sam_g49995 No alias AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g091420.2.1 LBD18, Solyc01g091420 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Solyc01g098220.2.1 LBD20, Solyc01g098220 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Solyc03g113360.4.1 LBD27, SCP,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Solyc05g048740.3.1 LBD11, Solyc05g048740 transcription factor (AS2/LOB) 0.01 OrthoFinder output from all 47 species
Solyc12g010810.1.1 LBD2, Solyc12g010810 transcription factor (AS2/LOB) 0.08 OrthoFinder output from all 47 species
Spa_g55835 LBD4 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05369 LBD4 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000390_P001 LBD29, ASL16,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Zm00001e000391_P001 LBD29, ASL16,... transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Zm00001e001031_P001 LBD18, Zm00001e001031 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e019004_P002 AS2, Zm00001e019004 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Zm00001e019686_P001 LBD20, Zm00001e019686 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e028582_P007 AS2, Zm00001e028582 transcription factor (AS2/LOB) 0.06 OrthoFinder output from all 47 species
Zm00001e030195_P001 LBD2, Zm00001e030195 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Zm00001e031510_P001 LBD12, ASL5,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Zm00001e038582_P001 LBD18, Zm00001e038582 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Zm00001e042347_P001 LBD29, ASL16,... transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Zm00001e042443_P001 LBD29, ASL16,... transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Zm00001e042444_P001 LBD29, ASL16,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Zm00001e042448_P001 LBD29, ASL16,... transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0042393 histone binding IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 76 174
No external refs found!