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  5. Ppi_g10717

Ppi_g10717


Description : component *(eL8) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001502 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001502_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g10717

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00218360 evm_27.TU.AmTr_v1... 60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AMTR_s00047p00140090 evm_27.TU.AmTr_v1... 60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AT2G47610 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.03 OrthoFinder output from all 47 species
AT3G62870 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.03 OrthoFinder output from all 47 species
Adi_g007366 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g02035 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Azfi_s0102.g044550 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.08G064100.1 Ceric.08G064100 component *(eL8) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000128.22 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Cre12.g529651 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Gb_36761 No alias component RPL7a of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os08g23710.1 LOC_Os08g23710 component RPL7a of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os09g32976.1 LOC_Os09g32976 component RPL7a of LSU proteome component 0.05 OrthoFinder output from all 47 species
Len_g06165 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
MA_109678g0010 No alias component RPL7a of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp2g23250.1 No alias component RPL7a of LSU proteome component 0.04 OrthoFinder output from all 47 species
Mp8g17650.1 No alias component RPL7a of LSU proteome component 0.03 OrthoFinder output from all 47 species
Msp_g01446 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c26_330V3.1 Pp3c26_330 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.02 OrthoFinder output from all 47 species
Pp3c9_380V3.1 Pp3c9_380 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.01 OrthoFinder output from all 47 species
Sam_g06600 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g28887 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Solyc01g097760.3.1 Solyc01g097760 component RPL7a of LSU proteome component 0.03 OrthoFinder output from all 47 species
Solyc06g050120.3.1 Solyc06g050120 component RPL7a of LSU proteome component 0.03 OrthoFinder output from all 47 species
Solyc06g064460.4.1 Solyc06g064460 component RPL7a of LSU proteome component 0.04 OrthoFinder output from all 47 species
Spa_g48863 No alias component *(eL8) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e010129_P001 Zm00001e010129 component RPL7a of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e034633_P002 Zm00001e034633 component RPL7a of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 124 208
No external refs found!