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  5. Ppi_g11638

Ppi_g11638


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g11638

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00174700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Aev_g37868 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18331 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.31G012200.1 Ceric.31G012200 not classified & original description: pacid=50574907... 0.05 OrthoFinder output from all 47 species
Ceric.32G071400.1 CRR22, Ceric.32G071400 not classified & original description: pacid=50598182... 0.05 OrthoFinder output from all 47 species
Dde_g04417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05750 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g05848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15725 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g21837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22592 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28518 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28521 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g35714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g21026 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27954 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g39417 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g41053 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02438 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03396 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0060.g015239 No alias not classified & original description: CDS=1-2529 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0177.g024659 No alias not classified & original description: CDS=1-642 0.03 OrthoFinder output from all 47 species
Spa_g53284 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14545 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g44078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e022253_P001 Zm00001e022253 Pentatricopeptide repeat-containing protein At1g59720,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 514 534
IPR002885 Pentatricopeptide_repeat 107 133
IPR002885 Pentatricopeptide_repeat 236 283
IPR002885 Pentatricopeptide_repeat 337 384
IPR002885 Pentatricopeptide_repeat 438 486
IPR002885 Pentatricopeptide_repeat 136 183
No external refs found!