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  5. Ppi_g11976

Ppi_g11976 (SRC2, (AT)SRC2)


Aliases : SRC2, (AT)SRC2

Description : ER-anchored membrane contact site protein *(SRC2) & original description: none


Gene families : OG0000271 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g11976
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Aop_g01613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53590.t1 SRC2, (AT)SRC2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64165.t1 Aspi01Gene64165 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G066200.1 Ceric.15G066200 not classified & original description: pacid=50640486... 0.04 OrthoFinder output from all 47 species
Dde_g08472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g43856 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.04 OrthoFinder output from all 47 species
Ehy_g02491 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_09311 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g30510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05625 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g11977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001207 No alias not classified & original description: CDS=1-2559 0.02 OrthoFinder output from all 47 species
Smo441151 SRC2, (AT)SRC2 Protein SRC2 homolog OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Tin_g14750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26283 SRC2, (AT)SRC2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e040422_P001 Zm00001e040422 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 5 105
No external refs found!