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  5. Ppi_g12009

Ppi_g12009 (YCF3)


Aliases : YCF3

Description : protein involved in PS-I assembly *(YCF3) & original description: none


Gene families : OG0006366 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006366_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g12009
Cluster HCCA: Cluster_299

Target Alias Description ECC score Gene Family Method Actions
Als_g33718 YCF3 protein involved in PS-I assembly *(YCF3) & original... 0.04 OrthoFinder output from all 47 species
Cba_g70304 YCF3 protein involved in PS-I assembly *(YCF3) & original... 0.05 OrthoFinder output from all 47 species
Ceric.09G047900.1 YCF3, Ceric.09G047900 protein involved in PS-I assembly *(YCF3) & original... 0.04 OrthoFinder output from all 47 species
LOC_Os01g57966.1 YCF3, LOC_Os01g57966 YCF3 protein involved in PS-I assembly 0.02 OrthoFinder output from all 47 species
LOC_Os04g16736.1 YCF3, LOC_Os04g16736 YCF3 protein involved in PS-I assembly 0.02 OrthoFinder output from all 47 species
LOC_Os04g16762.1 YCF3, LOC_Os04g16762 YCF3 protein involved in PS-I assembly 0.05 OrthoFinder output from all 47 species
LOC_Os10g21254.1 YCF3, LOC_Os10g21254 YCF3 protein involved in PS-I assembly 0.02 OrthoFinder output from all 47 species
LOC_Os10g38216.1 YCF3, LOC_Os10g38216 YCF3 protein involved in PS-I assembly 0.02 OrthoFinder output from all 47 species
Sam_g21679 No alias protein involved in PS-I assembly *(YCF3) & original... 0.02 OrthoFinder output from all 47 species
Solyc00g500058.1.1 YCF3, Solyc00g500058 YCF3 protein involved in PS-I assembly 0.04 OrthoFinder output from all 47 species
Solyc00g500059.1.1 Solyc00g500059 Photosystem I assembly protein Ycf3 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Solyc00g500144.1.1 Solyc00g500144 Photosystem I assembly protein Ycf3 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Solyc00g500210.1.1 YCF3, Solyc00g500210 YCF3 protein involved in PS-I assembly 0.04 OrthoFinder output from all 47 species
Solyc00g500211.1.1 Solyc00g500211 Photosystem I assembly protein Ycf3 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Spa_g00949 YCF3 protein involved in PS-I assembly *(YCF3) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001440 TPR_1 73 102
No external refs found!