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  5. Ppi_g12228

Ppi_g12228


Description : not classified & original description: none


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g12228
Cluster HCCA: Cluster_286

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00163410 PDCB5,... PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G63240 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g14411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62556.t1 Aspi01Gene62556 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g00460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G011500.1 Ceric.27G011500 not classified & original description: pacid=50604942... 0.03 OrthoFinder output from all 47 species
Dac_g03506 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g08788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16407 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_962758g0010 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g04114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g36355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015092 No alias not classified & original description: CDS=288-854 0.02 OrthoFinder output from all 47 species
Solyc04g058080.3.1 Solyc04g058080 Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g29752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005720_P001 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 61 131
No external refs found!