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  5. Ppi_g12281

Ppi_g12281


Description : not classified & original description: none


Gene families : OG0000563 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000563_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g12281

Target Alias Description ECC score Gene Family Method Actions
Adi_g053909 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0410.g068508 No alias not classified & original description: CDS=242-1558 0.03 OrthoFinder output from all 47 species
Cre12.g494550 No alias No description available 0.01 OrthoFinder output from all 47 species
Mp3g08570.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pnu_g17388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 142 208
IPR000504 RRM_dom 24 91
IPR000504 RRM_dom 287 353
No external refs found!