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  5. Ppi_g12780

Ppi_g12780


Description : not classified & original description: none


Gene families : OG0001815 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001815_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g12780

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00130p00053270 FLA20,... No description available 0.02 OrthoFinder output from all 47 species
AT1G15190 No alias Fasciclin-like arabinogalactan family protein 0.05 OrthoFinder output from all 47 species
Aspi01Gene24305.t1 Aspi01Gene24305 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene70725.t1 Aspi01Gene70725 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10051181g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g44261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0131.g022109 No alias not classified & original description: CDS=1-564 0.02 OrthoFinder output from all 47 species
Solyc05g008320.1.1 FLA20, Solyc05g008320 fasciclin-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Solyc07g053000.1.1 FLA21, Solyc07g053000 fasciclin-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Spa_g46225 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47560 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000782 FAS1_domain 57 159
No external refs found!